STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS89266.1Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (844 aa)    
Predicted Functional Partners:
SDR78312.1
Chitobiose phosphorylase.
 
  
 0.743
SDR77670.1
Cellulase/cellobiase CelA1; Belongs to the glycosyl hydrolase family 6.
 
  
  0.741
SDS21285.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.711
SDR77692.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
 0.663
SDS25253.1
Alpha-glucosidase.
   
 
 0.648
SDS40517.1
Alpha-glucosidase.
   
 
 0.648
SDS89225.1
Peptide/nickel transport system substrate-binding protein.
       0.615
SDS26032.1
Beta-glucosidase.
    
 0.604
SDS31020.1
Beta-glucosidase.
    
 0.604
SDS89305.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.593
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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