STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS90594.12,4-dienoyl-CoA reductase. (356 aa)    
Predicted Functional Partners:
SDS55938.1
Glutamate synthase (NADH) large subunit.
    
 0.944
SDS32145.1
Electron transfer flavoprotein beta subunit.
  
 
 0.886
SDS32200.1
Electron transfer flavoprotein alpha subunit apoprotein.
   
 
 0.795
SDS07410.1
Nitrate reductase beta subunit.
    
   0.719
SDS07563.1
Respiratory nitrate reductase beta subunit.
    
   0.719
SDS90635.1
Predicted arabinose efflux permease, MFS family.
  
    0.688
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.671
SDS83698.1
ferredoxin--NADP+ reductase.
   
  0.633
SDS16939.1
Transcriptional regulator, CarD family.
   
    0.617
SDS46715.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.604
Your Current Organism:
Paraoerskovia marina
NCBI taxonomy Id: 545619
Other names: DSM 21750, DSM 22126 [[Koreibacter algae]], JCM 17443 [[Koreibacter algae]], KCTC 13436 [[Koreibacter algae]], Koreibacter algae, Koreibacter algae Lee and Lee 2010, Micrococcineae bacterium DSW-2, NBRC 104352, P. marina, Paraoerskovia marina Khan et al. 2009 emend. Schumann et al. 2013, strain CTT-37, strain DSW-2 [[Koreibacter algae]]
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