Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_0081 | BMQ_0083 | BMQ_0081 | BMQ_0083 | Spore cortex biosynthesis protein. | S1 RNA binding domain protein. | 0.606 |
BMQ_0081 | divIC | BMQ_0081 | BMQ_0082 | Spore cortex biosynthesis protein. | Cell division protein DivIC. | 0.817 |
BMQ_0081 | yabP | BMQ_0081 | BMQ_0080 | Spore cortex biosynthesis protein. | Sporulation protein YabP. | 0.968 |
BMQ_0083 | BMQ_0081 | BMQ_0083 | BMQ_0081 | S1 RNA binding domain protein. | Spore cortex biosynthesis protein. | 0.606 |
BMQ_0083 | divIC | BMQ_0083 | BMQ_0082 | S1 RNA binding domain protein. | Cell division protein DivIC. | 0.675 |
BMQ_0083 | yabP | BMQ_0083 | BMQ_0080 | S1 RNA binding domain protein. | Sporulation protein YabP. | 0.599 |
BMQ_4599 | BMQ_4794 | BMQ_4599 | BMQ_4794 | Protein of unknown function (DUF1510). | Conserved hypothetical protein. | 0.682 |
BMQ_4599 | BMQ_4828 | BMQ_4599 | BMQ_4828 | Protein of unknown function (DUF1510). | Protein of unknown function (DUF1444); Belongs to the UPF0354 family. | 0.644 |
BMQ_4599 | divIC | BMQ_4599 | BMQ_0082 | Protein of unknown function (DUF1510). | Cell division protein DivIC. | 0.656 |
BMQ_4599 | ezrA | BMQ_4599 | BMQ_4805 | Protein of unknown function (DUF1510). | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.664 |
BMQ_4599 | ftsL | BMQ_4599 | BMQ_4282 | Protein of unknown function (DUF1510). | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.711 |
BMQ_4794 | BMQ_4599 | BMQ_4794 | BMQ_4599 | Conserved hypothetical protein. | Protein of unknown function (DUF1510). | 0.682 |
BMQ_4794 | BMQ_4828 | BMQ_4794 | BMQ_4828 | Conserved hypothetical protein. | Protein of unknown function (DUF1444); Belongs to the UPF0354 family. | 0.500 |
BMQ_4794 | divIB | BMQ_4794 | BMQ_4274 | Conserved hypothetical protein. | Cell division initiation protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.530 |
BMQ_4794 | divIC | BMQ_4794 | BMQ_0082 | Conserved hypothetical protein. | Cell division protein DivIC. | 0.636 |
BMQ_4794 | ezrA | BMQ_4794 | BMQ_4805 | Conserved hypothetical protein. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.774 |
BMQ_4794 | ftsL | BMQ_4794 | BMQ_4282 | Conserved hypothetical protein. | Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. | 0.646 |
BMQ_4822 | BMQ_4828 | BMQ_4822 | BMQ_4828 | Protein of unknown function (DUF948). | Protein of unknown function (DUF1444); Belongs to the UPF0354 family. | 0.787 |
BMQ_4822 | divIC | BMQ_4822 | BMQ_0082 | Protein of unknown function (DUF948). | Cell division protein DivIC. | 0.625 |
BMQ_4822 | ezrA | BMQ_4822 | BMQ_4805 | Protein of unknown function (DUF948). | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.526 |
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