Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BMQ_0366Lysine/ornithine N-monooxygenase. (429 aa)    
Predicted Functional Partners:
BMQ_4063
Siderophore biosynthesis protein.
 
  
 0.898
BMQ_4067
Siderophore biosynthesis protein.
 
  
 0.876
BMQ_4066
Putative siderophore biosynthesis protein.
 
  
 0.821
BMQ_4068
L-2,4-diaminobutyrate decarboxylase.
 
   
 0.746
BMQ_4069
2,4-diaminobutyrate 4-transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.634
BMQ_4064
Transporter (Major facilitator Superfamily).
 
   
 0.628
hmp
Flavohemoprotein (nitric oxide dioxygenase); Belongs to the globin family.
       0.566
BMQ_0367
Intracellular protease, PfpI family.
       0.542
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.418
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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