STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygaEPutative membrane protein. (362 aa)    
Predicted Functional Partners:
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
 
     0.705
BMQ_4970
Protein of unknown function (DUF1450); Belongs to the UPF0349 family.
  
     0.632
BMQ_4599
Protein of unknown function (DUF1510).
  
     0.628
BMQ_4821
Conserved hypothetical protein.
  
     0.613
walH
Regulator of WalKR.
  
     0.612
mreD
Rod shape-determining protein MreD.
  
     0.596
BMQ_4828
Protein of unknown function (DUF1444); Belongs to the UPF0354 family.
  
     0.549
divIC
Cell division protein DivIC.
  
     0.544
lipL
Biotin/lipoate A/B protein ligase family protein; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.
  
     0.524
BMQ_4822
Protein of unknown function (DUF948).
  
     0.519
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.