Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argB | argF | BMQ_0679 | BMQ_0683 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.978 |
argB | argH | BMQ_0679 | BMQ_4789 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Argininosuccinate lyase. | 0.960 |
argB | rocD | BMQ_0679 | BMQ_0662 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.801 |
argF | argB | BMQ_0683 | BMQ_0679 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.978 |
argF | argH | BMQ_0683 | BMQ_4789 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.948 |
argF | argI | BMQ_0683 | BMQ_0191 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginase; Belongs to the arginase family. | 0.911 |
argF | argI-2 | BMQ_0683 | BMQ_3899 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginase; Belongs to the arginase family. | 0.911 |
argF | rocD | BMQ_0683 | BMQ_0662 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.897 |
argH | argB | BMQ_4789 | BMQ_0679 | Argininosuccinate lyase. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.960 |
argH | argF | BMQ_4789 | BMQ_0683 | Argininosuccinate lyase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.948 |
argH | argI | BMQ_4789 | BMQ_0191 | Argininosuccinate lyase. | Arginase; Belongs to the arginase family. | 0.818 |
argH | argI-2 | BMQ_4789 | BMQ_3899 | Argininosuccinate lyase. | Arginase; Belongs to the arginase family. | 0.818 |
argH | rocD | BMQ_4789 | BMQ_0662 | Argininosuccinate lyase. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.794 |
argI | argF | BMQ_0191 | BMQ_0683 | Arginase; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.911 |
argI | argH | BMQ_0191 | BMQ_4789 | Arginase; Belongs to the arginase family. | Argininosuccinate lyase. | 0.818 |
argI | argI-2 | BMQ_0191 | BMQ_3899 | Arginase; Belongs to the arginase family. | Arginase; Belongs to the arginase family. | 0.901 |
argI | rocD | BMQ_0191 | BMQ_0662 | Arginase; Belongs to the arginase family. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.972 |
argI-2 | argF | BMQ_3899 | BMQ_0683 | Arginase; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.911 |
argI-2 | argH | BMQ_3899 | BMQ_4789 | Arginase; Belongs to the arginase family. | Argininosuccinate lyase. | 0.818 |
argI-2 | argI | BMQ_3899 | BMQ_0191 | Arginase; Belongs to the arginase family. | Arginase; Belongs to the arginase family. | 0.901 |
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