STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_0959Allophanate hydrolase subunit 1. (240 aa)    
Predicted Functional Partners:
BMQ_0960
Allophanate hydrolase subunit 2.
 
 0.999
BMQ_2488
Allophanate hydrolase subunit 2.
 
 0.997
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.988
pxpA-2
Conserved hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.962
BMQ_0962
Uncharacterized membrane protein ycsG.
 
  
 0.943
BMQ_2485
Bacterial transcriptional regulator.
  
  
 0.829
BMQ_2491
Conserved hypothetical protein.
 
  
 0.790
BMQ_2490
Conserved hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.786
BMQ_2855
Transcriptional regulator, IclR family.
  
    0.749
BMQ_0911
Transcriptional regulator, IclR family.
  
    0.665
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.