STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_1047Cyclic diguanylate phosphodiesterase. (257 aa)    
Predicted Functional Partners:
BMQ_1048
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
 0.920
BMQ_0992
Diguanylate cyclase/phosphodiesterase.
 
 
 0.897
BMQ_1426
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
  
 0.877
BMQ_1084
Diguanylate cyclase/phosphodiesterase.
 
  
 0.811
BMQ_1088
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.747
BMQ_0935
Response regulator diguanylate cyclase/phosphodiesterase.
 
 
 0.734
BMQ_2286
Signal transduction histidine kinase with CheB and CheR activity.
  
  
 0.732
BMQ_1324
Diguanylate cyclase/phosphodiesterase.
  
     0.692
BMQ_3829
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor.
 
 
0.610
cheV
Chemotaxis protein CheV.
 
  
 0.602
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.