STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_1237Transcriptional regulator, GntR family. (239 aa)    
Predicted Functional Partners:
BMQ_2866
Transcriptional regulator, GntR family.
  
  
 0.757
BMQ_2048
Bacterial regulatory protein, gntR family.
  
  
 0.714
BMQ_3914
Transcriptional regulator, GntR family.
  
  
 0.657
yurK
Putative transcriptional regulator, GntR family.
  
    0.627
yydK
Hypothetical transcriptional regulator YydK.
  
    0.622
BMQ_1510
Transcriptional regulator, GntR family.
  
    0.547
BMQ_0834
TRAP transporter solute receptor, DctP family.
 
     0.513
BMQ_1236
Cobalamin binding domain protein.
       0.505
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
       0.485
BMQ_4132
Transcriptional regulator, GntR family.
  
    0.469
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.