Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_1676 | BMQ_2245 | BMQ_1676 | BMQ_2245 | Spore germination protein (amino acid permease). | Spore germination protein GerA. | 0.736 |
BMQ_1676 | gerAA | BMQ_1676 | BMQ_3998 | Spore germination protein (amino acid permease). | Spore germination protein A1. | 0.505 |
BMQ_1676 | gerKA | BMQ_1676 | BMQ_1270 | Spore germination protein (amino acid permease). | Spore germination protein KA. | 0.688 |
BMQ_1676 | gerKA-2 | BMQ_1676 | BMQ_1606 | Spore germination protein (amino acid permease). | Spore germination protein KA. | 0.639 |
BMQ_1676 | gerKC | BMQ_1676 | BMQ_1271 | Spore germination protein (amino acid permease). | Spore germination protein KC. | 0.787 |
BMQ_2234 | BMQ_2236 | BMQ_2234 | BMQ_2236 | Putative spore germination protein. | Putative spore germination protein. | 0.504 |
BMQ_2234 | BMQ_2245 | BMQ_2234 | BMQ_2245 | Putative spore germination protein. | Spore germination protein GerA. | 0.737 |
BMQ_2234 | gerAA | BMQ_2234 | BMQ_3998 | Putative spore germination protein. | Spore germination protein A1. | 0.617 |
BMQ_2234 | gerAB | BMQ_2234 | BMQ_3999 | Putative spore germination protein. | Spore germination protein A2. | 0.714 |
BMQ_2234 | gerKA | BMQ_2234 | BMQ_1270 | Putative spore germination protein. | Spore germination protein KA. | 0.752 |
BMQ_2234 | gerKA-2 | BMQ_2234 | BMQ_1606 | Putative spore germination protein. | Spore germination protein KA. | 0.639 |
BMQ_2234 | gerKC | BMQ_2234 | BMQ_1271 | Putative spore germination protein. | Spore germination protein KC. | 0.799 |
BMQ_2236 | BMQ_2234 | BMQ_2236 | BMQ_2234 | Putative spore germination protein. | Putative spore germination protein. | 0.504 |
BMQ_2236 | BMQ_2245 | BMQ_2236 | BMQ_2245 | Putative spore germination protein. | Spore germination protein GerA. | 0.745 |
BMQ_2236 | gerAA | BMQ_2236 | BMQ_3998 | Putative spore germination protein. | Spore germination protein A1. | 0.626 |
BMQ_2236 | gerKA | BMQ_2236 | BMQ_1270 | Putative spore germination protein. | Spore germination protein KA. | 0.756 |
BMQ_2236 | gerKA-2 | BMQ_2236 | BMQ_1606 | Putative spore germination protein. | Spore germination protein KA. | 0.665 |
BMQ_2236 | gerKC | BMQ_2236 | BMQ_1271 | Putative spore germination protein. | Spore germination protein KC. | 0.785 |
BMQ_2245 | BMQ_1676 | BMQ_2245 | BMQ_1676 | Spore germination protein GerA. | Spore germination protein (amino acid permease). | 0.736 |
BMQ_2245 | BMQ_2234 | BMQ_2245 | BMQ_2234 | Spore germination protein GerA. | Putative spore germination protein. | 0.737 |
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