Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_0567 | BMQ_1327 | BMQ_0567 | BMQ_1327 | Conserved hypothetical protein; Belongs to the UPF0342 family. | Protein of unknown function (DUF1797). | 0.538 |
BMQ_0567 | BMQ_4302 | BMQ_0567 | BMQ_4302 | Conserved hypothetical protein; Belongs to the UPF0342 family. | Conserved hypothetical protein. | 0.423 |
BMQ_1308 | BMQ_1327 | BMQ_1308 | BMQ_1327 | Conserved hypothetical protein. | Protein of unknown function (DUF1797). | 0.706 |
BMQ_1308 | csbA | BMQ_1308 | BMQ_5085 | Conserved hypothetical protein. | CsbA protein. | 0.528 |
BMQ_1326 | BMQ_1327 | BMQ_1326 | BMQ_1327 | Glutaredoxin. | Protein of unknown function (DUF1797). | 0.494 |
BMQ_1327 | BMQ_0567 | BMQ_1327 | BMQ_0567 | Protein of unknown function (DUF1797). | Conserved hypothetical protein; Belongs to the UPF0342 family. | 0.538 |
BMQ_1327 | BMQ_1308 | BMQ_1327 | BMQ_1308 | Protein of unknown function (DUF1797). | Conserved hypothetical protein. | 0.706 |
BMQ_1327 | BMQ_1326 | BMQ_1327 | BMQ_1326 | Protein of unknown function (DUF1797). | Glutaredoxin. | 0.494 |
BMQ_1327 | BMQ_1328 | BMQ_1327 | BMQ_1328 | Protein of unknown function (DUF1797). | Conserved hypothetical protein. | 0.635 |
BMQ_1327 | BMQ_3305 | BMQ_1327 | BMQ_3305 | Protein of unknown function (DUF1797). | Conserved hypothetical protein. | 0.430 |
BMQ_1327 | BMQ_4302 | BMQ_1327 | BMQ_4302 | Protein of unknown function (DUF1797). | Conserved hypothetical protein. | 0.488 |
BMQ_1327 | BMQ_4836 | BMQ_1327 | BMQ_4836 | Protein of unknown function (DUF1797). | Phosphotransferase. | 0.496 |
BMQ_1327 | BMQ_5131 | BMQ_1327 | BMQ_5131 | Protein of unknown function (DUF1797). | Putative replication initiation protein. | 0.449 |
BMQ_1327 | csbA | BMQ_1327 | BMQ_5085 | Protein of unknown function (DUF1797). | CsbA protein. | 0.436 |
BMQ_1327 | mreD | BMQ_1327 | BMQ_4667 | Protein of unknown function (DUF1797). | Rod shape-determining protein MreD. | 0.419 |
BMQ_1328 | BMQ_1327 | BMQ_1328 | BMQ_1327 | Conserved hypothetical protein. | Protein of unknown function (DUF1797). | 0.635 |
BMQ_1328 | BMQ_4302 | BMQ_1328 | BMQ_4302 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.507 |
BMQ_1328 | mreD | BMQ_1328 | BMQ_4667 | Conserved hypothetical protein. | Rod shape-determining protein MreD. | 0.452 |
BMQ_3305 | BMQ_1327 | BMQ_3305 | BMQ_1327 | Conserved hypothetical protein. | Protein of unknown function (DUF1797). | 0.430 |
BMQ_4302 | BMQ_0567 | BMQ_4302 | BMQ_0567 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0342 family. | 0.423 |
page 1 of 2