Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_0385 | BMQ_0418 | BMQ_0385 | BMQ_0418 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.638 |
BMQ_0385 | BMQ_1395 | BMQ_0385 | BMQ_1395 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.488 |
BMQ_0385 | BMQ_4574 | BMQ_0385 | BMQ_4574 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.535 |
BMQ_0385 | BMQ_4842 | BMQ_0385 | BMQ_4842 | Conserved hypothetical protein. | Transcriptional regulator (DeoR family). | 0.487 |
BMQ_0418 | BMQ_0385 | BMQ_0418 | BMQ_0385 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.638 |
BMQ_0418 | BMQ_1395 | BMQ_0418 | BMQ_1395 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.591 |
BMQ_0418 | BMQ_4842 | BMQ_0418 | BMQ_4842 | Conserved hypothetical protein. | Transcriptional regulator (DeoR family). | 0.562 |
BMQ_1394 | BMQ_1395 | BMQ_1394 | BMQ_1395 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.587 |
BMQ_1394 | BMQ_1396 | BMQ_1394 | BMQ_1396 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.507 |
BMQ_1394 | dinG | BMQ_1394 | BMQ_1393 | Conserved hypothetical protein. | DnaQ family exonuclease/DinG family helicase, putative; 3'-5' exonuclease. | 0.595 |
BMQ_1395 | BMQ_0385 | BMQ_1395 | BMQ_0385 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.488 |
BMQ_1395 | BMQ_0418 | BMQ_1395 | BMQ_0418 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.591 |
BMQ_1395 | BMQ_1394 | BMQ_1395 | BMQ_1394 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.587 |
BMQ_1395 | BMQ_1396 | BMQ_1395 | BMQ_1396 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.879 |
BMQ_1395 | BMQ_1687 | BMQ_1395 | BMQ_1687 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.452 |
BMQ_1395 | BMQ_4574 | BMQ_1395 | BMQ_4574 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.488 |
BMQ_1395 | BMQ_4842 | BMQ_1395 | BMQ_4842 | Conserved hypothetical protein. | Transcriptional regulator (DeoR family). | 0.582 |
BMQ_1395 | aspB | BMQ_1395 | BMQ_1397 | Conserved hypothetical protein. | Aspartate aminotransferase. | 0.513 |
BMQ_1395 | dinG | BMQ_1395 | BMQ_1393 | Conserved hypothetical protein. | DnaQ family exonuclease/DinG family helicase, putative; 3'-5' exonuclease. | 0.535 |
BMQ_1395 | yneB | BMQ_1395 | BMQ_4090 | Conserved hypothetical protein. | Resolvase YneB. | 0.551 |
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