STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_1482Conserved hypothetical protein. (259 aa)    
Predicted Functional Partners:
penP
Beta-lactamase penicillinase.
     
  0.900
BMQ_1480
Cell wall endopeptidase.
 
    0.845
ykfD
Putative oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.795
BMQ_1479
Putative L,D-carboxypeptidase.
 
     0.758
dppE
Dipeptide ABC transporter, dipeptide-binding protein DppE.
 
     0.581
dppA
D-aminopeptidase.
 
     0.552
dppB
Dipeptide ABC transporter, permease protein DppB.
       0.459
dppC
Dipeptide ABC transporter, permease protein DppC.
       0.459
dppD
Dipeptide ABC transporter, ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
       0.431
mtaD
Amidohydrolase family protein; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.
  
    0.421
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.