Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
tfxGTrifolitoxin immunity protein. (263 aa)    
Predicted Functional Partners:
BMQ_2009
DNA polymerase I.
     
 0.682
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.682
BMQ_0359
Hypothetical protein.
  
     0.606
BMQ_1924
Conserved hypothetical protein.
       0.519
BMQ_2286
Signal transduction histidine kinase with CheB and CheR activity.
  
  
 0.517
BMQ_1127
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.507
cheV
Chemotaxis protein CheV.
  
  
 0.491
BMQ_4538
Conserved hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.484
kapB
Kinase-associated protein B (sporulation).
  
     0.472
BMQ_2333
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
     0.449
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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