Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
BMQ_1985Metal-dependent phosphohydrolase. (217 aa)    
Predicted Functional Partners:
yfmR
Putative ABC transporter, ATP-binding protein.
  
    0.872
BMQ_1984
Glutathione peroxidase family protein; Belongs to the glutathione peroxidase family.
  
    0.796
BMQ_1987
Conserved hypothetical protein.
  
  
 0.795
BMQ_2467
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
 
    
 0.702
BMQ_1983
Conserved hypothetical protein.
       0.667
fhs
Formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.
       0.588
BMQ_1383
Pyrophosphatase YpjD.
      
 0.577
dck
Deoxyadenosine/deoxycytidine kinase.
 
     0.518
BMQ_0742
ATP-dependent DNA helicase.
       0.478
BMQ_1989
Conserved hypothetical protein; Belongs to the UPF0403 family.
       0.478
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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