STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_2010Conserved hypothetical protein. (115 aa)    
Predicted Functional Partners:
BMQ_2011
Conserved hypothetical protein.
    0.997
BMQ_2009
DNA polymerase I.
       0.789
proI
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
    0.762
yusF
DNA primase, Toprim domain protein.
  
     0.616
BMQ_0746
2',5' RNA ligase family; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.572
BMQ_1417
Conserved hypothetical protein.
  
  
 0.542
ctaG
Cytochrome c oxidase assembly factor CtaG.
  
     0.515
BMQ_5194
Conserved hypothetical protein.
  
     0.497
BMQ_3554
Putative lipoprotein.
  
     0.478
thiD-2
Phosphomethylpyrimidine kinase.
       0.478
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.