STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_2102Hypothetical protein. (485 aa)    
Predicted Functional Partners:
BMQ_1826
Hypothetical protein.
  
     0.714
BMQ_2734
Conserved hypothetical protein.
  
     0.566
bcrC
Bacitracin transport permease.
  
    0.551
BMQ_1876
Hypothetical protein.
  
     0.535
BMQ_2100
Hypothetical protein.
       0.526
BMQ_2101
Conserved hypothetical protein.
       0.526
yybG
Pentapeptide repeats protein YybG.
  
    0.514
BMQ_0825
Conserved hypothetical protein.
  
     0.513
BMQ_3503
Zinc carboxypeptidase family protein.
  
     0.513
BMQ_3167
Peptidase, M56 domain protein.
  
     0.510
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.