Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_0933 | BMQ_1777 | BMQ_0933 | BMQ_1777 | Xylose isomerase domain protein TIM barrel. | Xylose isomerase domain protein TIM barrel. | 0.798 |
BMQ_0933 | BMQ_2147 | BMQ_0933 | BMQ_2147 | Xylose isomerase domain protein TIM barrel. | Conserved hypothetical protein. | 0.784 |
BMQ_0933 | BMQ_2148 | BMQ_0933 | BMQ_2148 | Xylose isomerase domain protein TIM barrel. | NADH-dependent dehydrogenase. | 0.721 |
BMQ_0933 | BMQ_2149 | BMQ_0933 | BMQ_2149 | Xylose isomerase domain protein TIM barrel. | Oxidoreductase. | 0.811 |
BMQ_0933 | BMQ_2150 | BMQ_0933 | BMQ_2150 | Xylose isomerase domain protein TIM barrel. | Xylose isomerase domain protein TIM barrel. | 0.813 |
BMQ_0933 | iolB | BMQ_0933 | BMQ_0494 | Xylose isomerase domain protein TIM barrel. | 5-deoxy-glucuronate isomerase. | 0.451 |
BMQ_0933 | iolB-2 | BMQ_0933 | BMQ_3470 | Xylose isomerase domain protein TIM barrel. | 5-deoxy-glucuronate isomerase. | 0.451 |
BMQ_0933 | iolD | BMQ_0933 | BMQ_0491 | Xylose isomerase domain protein TIM barrel. | Myo-inositol catabolism protein IolD; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). | 0.497 |
BMQ_0933 | iolD-2 | BMQ_0933 | BMQ_3471 | Xylose isomerase domain protein TIM barrel. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). | 0.497 |
BMQ_1774 | BMQ_1777 | BMQ_1774 | BMQ_1777 | Xylose isomerase domain protein TIM barrel. | Xylose isomerase domain protein TIM barrel. | 0.695 |
BMQ_1774 | BMQ_2148 | BMQ_1774 | BMQ_2148 | Xylose isomerase domain protein TIM barrel. | NADH-dependent dehydrogenase. | 0.639 |
BMQ_1774 | BMQ_2149 | BMQ_1774 | BMQ_2149 | Xylose isomerase domain protein TIM barrel. | Oxidoreductase. | 0.660 |
BMQ_1774 | BMQ_2150 | BMQ_1774 | BMQ_2150 | Xylose isomerase domain protein TIM barrel. | Xylose isomerase domain protein TIM barrel. | 0.469 |
BMQ_1774 | iolB | BMQ_1774 | BMQ_0494 | Xylose isomerase domain protein TIM barrel. | 5-deoxy-glucuronate isomerase. | 0.907 |
BMQ_1774 | iolB-2 | BMQ_1774 | BMQ_3470 | Xylose isomerase domain protein TIM barrel. | 5-deoxy-glucuronate isomerase. | 0.920 |
BMQ_1774 | iolD | BMQ_1774 | BMQ_0491 | Xylose isomerase domain protein TIM barrel. | Myo-inositol catabolism protein IolD; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). | 0.991 |
BMQ_1774 | iolD-2 | BMQ_1774 | BMQ_3471 | Xylose isomerase domain protein TIM barrel. | 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Involved in the cleavage of the C1-C2 bond of 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy-glucuronate (5DG). | 0.991 |
BMQ_1777 | BMQ_0933 | BMQ_1777 | BMQ_0933 | Xylose isomerase domain protein TIM barrel. | Xylose isomerase domain protein TIM barrel. | 0.798 |
BMQ_1777 | BMQ_1774 | BMQ_1777 | BMQ_1774 | Xylose isomerase domain protein TIM barrel. | Xylose isomerase domain protein TIM barrel. | 0.695 |
BMQ_1777 | BMQ_2147 | BMQ_1777 | BMQ_2147 | Xylose isomerase domain protein TIM barrel. | Conserved hypothetical protein. | 0.781 |
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