STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_2456NAD dependent epimerase/dehydratase family. (214 aa)    
Predicted Functional Partners:
ctaC
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.949
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.911
qcrA
Menaquinol-cytochrome c reductase, iron-sulfur subunit.
 
 
 0.863
BMQ_2996
FAD dependent oxidoreductase.
  
 
 0.857
dck
Deoxyadenosine/deoxycytidine kinase.
   
 0.841
dgk
Deoxyguanosine kinase.
   
 0.841
BMQ_4126
Peptidase, M16 family protein.
   
 
 0.731
BMQ_4127
Putative Zn-protease.
   
 
 0.731
mlpA
Zinc protease; Belongs to the peptidase M16 family.
   
 
 0.731
qcrB
menaquinol-Cytochrome c reductase cytochrome b6 subunit.
  
 
 0.694
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.