Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_2113 | BMQ_2586 | BMQ_2113 | BMQ_2586 | Acetyltransferase, GNAT family. | Conserved hypothetical protein. | 0.586 |
BMQ_2586 | BMQ_2113 | BMQ_2586 | BMQ_2113 | Conserved hypothetical protein. | Acetyltransferase, GNAT family. | 0.586 |
BMQ_2586 | BMQ_2587 | BMQ_2586 | BMQ_2587 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.550 |
BMQ_2586 | BMQ_2588 | BMQ_2586 | BMQ_2588 | Conserved hypothetical protein. | Hypothetical protein. | 0.495 |
BMQ_2586 | BMQ_3958 | BMQ_2586 | BMQ_3958 | Conserved hypothetical protein. | Acetyltransferase, GNAT family. | 0.722 |
BMQ_2586 | BMQ_4072 | BMQ_2586 | BMQ_4072 | Conserved hypothetical protein. | FAD binding domain of DNA photolyase. | 0.408 |
BMQ_2586 | ddl | BMQ_2586 | BMQ_0219 | Conserved hypothetical protein. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.644 |
BMQ_2586 | pupG | BMQ_2586 | BMQ_4395 | Conserved hypothetical protein. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.631 |
BMQ_2586 | thiI | BMQ_2586 | BMQ_4803 | Conserved hypothetical protein. | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.447 |
BMQ_2587 | BMQ_2586 | BMQ_2587 | BMQ_2586 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.550 |
BMQ_2587 | BMQ_2588 | BMQ_2587 | BMQ_2588 | Conserved hypothetical protein. | Hypothetical protein. | 0.689 |
BMQ_2588 | BMQ_2586 | BMQ_2588 | BMQ_2586 | Hypothetical protein. | Conserved hypothetical protein. | 0.495 |
BMQ_2588 | BMQ_2587 | BMQ_2588 | BMQ_2587 | Hypothetical protein. | Conserved hypothetical protein. | 0.689 |
BMQ_3958 | BMQ_2586 | BMQ_3958 | BMQ_2586 | Acetyltransferase, GNAT family. | Conserved hypothetical protein. | 0.722 |
BMQ_4072 | BMQ_2586 | BMQ_4072 | BMQ_2586 | FAD binding domain of DNA photolyase. | Conserved hypothetical protein. | 0.408 |
ddl | BMQ_2586 | BMQ_0219 | BMQ_2586 | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Conserved hypothetical protein. | 0.644 |
pupG | BMQ_2586 | BMQ_4395 | BMQ_2586 | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Conserved hypothetical protein. | 0.631 |
thiI | BMQ_2586 | BMQ_4803 | BMQ_2586 | Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Conserved hypothetical protein. | 0.447 |