STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_2704Putative ABC transporter, permease protein. (326 aa)    
Predicted Functional Partners:
BMQ_2705
Putative ABC transporter, ATP-binding protein.
 
 
 0.968
BMQ_2706
GDSL-like lipase/acylhydrolase.
 
    0.937
ydbJ
Putative ABC transporter, ATP-binding protein.
 
 
 0.749
BMQ_2707
Uncharacterized oxidoreductase.
       0.690
BMQ_3017
Glutathionylspermidine synthase.
  
     0.562
BMQ_2311
Conserved hypothetical protein.
  
     0.561
BMQ_4053
GDSL-like lipase/acylhydrolase.
 
    0.552
BMQ_4012
Putative ABC transporter, ATP-binding protein.
  
 
 0.550
BMQ_1053
Conserved hypothetical protein.
  
     0.536
BMQ_2270
ABC transporter, ATP-binding protein.
  
 
 0.529
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.