STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_2796Putative ABC transporter, permease protein. (275 aa)    
Predicted Functional Partners:
BMQ_2797
Putative ABC transporter, permease protein.
 0.996
BMQ_2795
Putative ABC transporter, substrate-binding protein.
 
 0.994
amyD
Carbohydrate ABC transporter, permease protein AmyD.
 0.986
msmX
Maltodextrin import ABC transporter, ATP-binding protein MsmX.
 
 0.977
BMQ_1444
Putative ABC transporter, permease protein.
 0.976
msmX-2
Maltodextrin import ABC transporter, ATP-binding protein MsmX.
 
 0.976
yurJ
Putative sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.976
yurN
Putative ABC transporter, permease protein.
 0.976
BMQ_0603
Extracellular solute-binding protein.
 
 
 0.890
araP
L-arabinose ABC transporter, permease protein AraP.
 
 0.888
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.