STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_3123Acetyltransferase, GNAT family. (180 aa)    
Predicted Functional Partners:
BMQ_3382
Acetyltransferase, GNAT family.
  
     0.684
BMQ_3093
Ribosomal-protein-alanine acetyltransferase.
  
     0.638
BMQ_1628
Acetyltransferase, GNAT family.
  
     0.631
BMQ_1484
Acetyltransferase, GNAT family.
  
     0.623
BMQ_2247
Ribosomal-protein-serine acetyltransferase GNAT family.
  
     0.590
BMQ_3124
Conserved hypothetical protein.
       0.526
BMQ_3122
Trascription regulator domain protein.
       0.491
BMQ_1455
Acetyltransferase, GNAT family.
  
     0.408
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.