Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gatB-3PTS system, galactitol-specific IIB component. (98 aa)    
Predicted Functional Partners:
gatA-3
PTS system, galactitol-specific IIA component.
 
 
 0.996
gatC-2
PTS system, galactitol-specific IIC component.
 
 
 0.993
gatB-2
PTS system, galactitol-specific IIB component.
 
  
 
0.962
BMQ_3205
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.944
ptsH
Phosphocarrier protein HPr.
    
  0.902
BMQ_3199
Alcohol dehydrogenase.
 
    0.842
BMQ_1021
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 domain protein.
 
  
 0.796
BMQ_3200
Galactitol-1-phosphate 5-dehydrogenase.
 
    0.792
licR
Transcriptional activator of the lichenan operon.
 
  
 0.713
BMQ_0203
PRD domain protein.
 
  
 0.707
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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