STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_3205Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2. (680 aa)    
Predicted Functional Partners:
gatB-3
PTS system, galactitol-specific IIB component.
 
  
 0.944
fruA
Phosphotransferase system (PTS) fructose-specific enzyme IIABC component.
 
  
 0.932
gatA-3
PTS system, galactitol-specific IIA component.
 
  
 0.927
gatB-2
PTS system, galactitol-specific IIB component.
 
  
 0.926
gatC-2
PTS system, galactitol-specific IIC component.
 
  
 0.917
BMQ_0202
PTS system, mannitol-specific IIC component.
 
  
 0.903
BMQ_3353
PTS system, beta-glucoside-specific IIABC component.
 
 
 0.876
BMQ_1023
Putative sugar-specific permease.
 
  
 0.855
ptsG
PTS system, glucose-specific IIBC component.
  
 
 0.853
BMQ_1022
PTS system, lactose/cellobiose specific IIB subunit family protein.
 
  
 0.838
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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