STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_3206Flavodoxin-like fold family protein. (187 aa)    
Predicted Functional Partners:
BMQ_3922
Flavodoxin-like fold family protein.
  
     0.649
BMQ_3780
Flavodoxin-like fold family protein.
  
     0.640
BMQ_3657
Putative NAD(P)H dehydrogenase (quinone).
  
     0.550
sipS
Signal peptidase I S; Belongs to the peptidase S26 family.
  
    0.408
BMQ_3205
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
       0.403
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.