STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_3529Transporter, LysE family. (211 aa)    
Predicted Functional Partners:
BMQ_2727
Conserved hypothetical protein.
  
     0.584
BMQ_3528
Conserved hypothetical protein.
       0.531
BMQ_2540
Conserved hypothetical protein.
 
    0.465
BMQ_3530
Hypothetical protein.
       0.463
BMQ_3275
Conserved hypothetical protein.
  
     0.452
BMQ_2581
Conserved hypothetical protein.
  
     0.439
BMQ_2990
Putative spore coat protein.
 
     0.435
BMQ_1797
Conserved hypothetical protein.
  
     0.434
BMQ_4087
Conserved hypothetical protein.
  
     0.431
sspF
Small acid-soluble spore protein F (minor alpha/beta-type SASP); May play some important role in either sporulation or the dormant spore.
  
     0.426
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.