Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_3585 | BMQ_3586 | BMQ_3585 | BMQ_3586 | 4-oxalocrotonate tautomerase family enzyme. | 4-oxalocrotonate decarboxylase. | 0.989 |
BMQ_3585 | BMQ_3589 | BMQ_3585 | BMQ_3589 | 4-oxalocrotonate tautomerase family enzyme. | Hydratase/decarboxylase family protein. | 0.884 |
BMQ_3585 | BMQ_3590 | BMQ_3585 | BMQ_3590 | 4-oxalocrotonate tautomerase family enzyme. | Aldehyde dehydrogenase (NAD) family protein; Belongs to the aldehyde dehydrogenase family. | 0.953 |
BMQ_3585 | BMQ_3591 | BMQ_3585 | BMQ_3591 | 4-oxalocrotonate tautomerase family enzyme. | Endoribonuclease L-PSP. | 0.568 |
BMQ_3585 | BMQ_3592 | BMQ_3585 | BMQ_3592 | 4-oxalocrotonate tautomerase family enzyme. | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase. | 0.673 |
BMQ_3585 | dmpG | BMQ_3585 | BMQ_3587 | 4-oxalocrotonate tautomerase family enzyme. | 4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | 0.880 |
BMQ_3585 | hpaB-2 | BMQ_3585 | BMQ_3596 | 4-oxalocrotonate tautomerase family enzyme. | 4-hydroxyphenylacetate-3-hydroxylase. | 0.442 |
BMQ_3585 | mhpF | BMQ_3585 | BMQ_3588 | 4-oxalocrotonate tautomerase family enzyme. | Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.885 |
BMQ_3585 | nbaC | BMQ_3585 | BMQ_3593 | 4-oxalocrotonate tautomerase family enzyme. | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. | 0.600 |
BMQ_3586 | BMQ_3585 | BMQ_3586 | BMQ_3585 | 4-oxalocrotonate decarboxylase. | 4-oxalocrotonate tautomerase family enzyme. | 0.989 |
BMQ_3586 | BMQ_3589 | BMQ_3586 | BMQ_3589 | 4-oxalocrotonate decarboxylase. | Hydratase/decarboxylase family protein. | 0.974 |
BMQ_3586 | BMQ_3590 | BMQ_3586 | BMQ_3590 | 4-oxalocrotonate decarboxylase. | Aldehyde dehydrogenase (NAD) family protein; Belongs to the aldehyde dehydrogenase family. | 0.660 |
BMQ_3586 | BMQ_3591 | BMQ_3586 | BMQ_3591 | 4-oxalocrotonate decarboxylase. | Endoribonuclease L-PSP. | 0.683 |
BMQ_3586 | BMQ_3592 | BMQ_3586 | BMQ_3592 | 4-oxalocrotonate decarboxylase. | 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase. | 0.793 |
BMQ_3586 | dmpG | BMQ_3586 | BMQ_3587 | 4-oxalocrotonate decarboxylase. | 4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. | 0.959 |
BMQ_3586 | hpaB-2 | BMQ_3586 | BMQ_3596 | 4-oxalocrotonate decarboxylase. | 4-hydroxyphenylacetate-3-hydroxylase. | 0.712 |
BMQ_3586 | mhpF | BMQ_3586 | BMQ_3588 | 4-oxalocrotonate decarboxylase. | Acetaldehyde dehydrogenase (acetylating); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.987 |
BMQ_3586 | nbaC | BMQ_3586 | BMQ_3593 | 4-oxalocrotonate decarboxylase. | 3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. | 0.747 |
BMQ_3589 | BMQ_3585 | BMQ_3589 | BMQ_3585 | Hydratase/decarboxylase family protein. | 4-oxalocrotonate tautomerase family enzyme. | 0.884 |
BMQ_3589 | BMQ_3586 | BMQ_3589 | BMQ_3586 | Hydratase/decarboxylase family protein. | 4-oxalocrotonate decarboxylase. | 0.974 |
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