Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BMQ_3602Conserved hypothetical protein. (282 aa)    
Predicted Functional Partners:
ctaC
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
   0.831
BMQ_2996
FAD dependent oxidoreductase.
  
 
 0.721
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.718
BMQ_1915
2Fe-2S iron-sulfur cluster binding domain protein.
  
 
 
 0.683
BMQ_1278
Conserved hypothetical protein.
  
   0.594
BMQ_2456
NAD dependent epimerase/dehydratase family.
  
   0.594
qcrA
Menaquinol-cytochrome c reductase, iron-sulfur subunit.
   
   0.569
BMQ_4126
Peptidase, M16 family protein.
  
 
 
 0.566
BMQ_3601
Hypothetical protein.
       0.513
BMQ_4127
Putative Zn-protease.
    
 
 0.507
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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