STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_3916Conserved hypothetical protein. (192 aa)    
Predicted Functional Partners:
BMQ_2683
Bacillus transposase protein.
 
  
 0.823
BMQ_0350
Conserved hypothetical protein.
  
     0.581
cotH
Inner spore coat protein.
  
     0.529
BMQ_0351
FtsK/SpoIIIE family.
  
     0.520
BMQ_1493
Conserved hypothetical protein.
  
     0.467
BMQ_2740
Phospholipase, patatin family.
  
     0.463
BMQ_4134
Conserved hypothetical protein.
  
     0.450
pepQ
Xaa-Pro dipeptidase.
       0.433
BMQ_5126
Conserved hypothetical protein.
  
     0.432
BMQ_0352
Conserved hypothetical protein.
  
     0.428
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.