Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BMQ_2780 | cdd | BMQ_2780 | BMQ_2778 | Pyrimidine-nucleoside phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.993 |
BMQ_2780 | cdd-2 | BMQ_2780 | BMQ_4549 | Pyrimidine-nucleoside phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.985 |
BMQ_2780 | pyrR | BMQ_2780 | BMQ_4257 | Pyrimidine-nucleoside phosphorylase. | Uracil phosphoribosyl transferase/pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.921 |
BMQ_2780 | udk | BMQ_2780 | BMQ_4603 | Pyrimidine-nucleoside phosphorylase. | Uridine kinase. | 0.938 |
BMQ_2780 | upp | BMQ_2780 | BMQ_5159 | Pyrimidine-nucleoside phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.956 |
BMQ_2780 | yfkN | BMQ_2780 | BMQ_2701 | Pyrimidine-nucleoside phosphorylase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | 0.928 |
BMQ_4604 | udk | BMQ_4604 | BMQ_4603 | Peptidase, U32 family. | Uridine kinase. | 0.951 |
cdd | BMQ_2780 | BMQ_2778 | BMQ_2780 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Pyrimidine-nucleoside phosphorylase. | 0.993 |
cdd | cdd-2 | BMQ_2778 | BMQ_4549 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.902 |
cdd | udk | BMQ_2778 | BMQ_4603 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine kinase. | 0.925 |
cdd | yfkN | BMQ_2778 | BMQ_2701 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | 0.907 |
cdd-2 | BMQ_2780 | BMQ_4549 | BMQ_2780 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Pyrimidine-nucleoside phosphorylase. | 0.985 |
cdd-2 | cdd | BMQ_4549 | BMQ_2778 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.902 |
cdd-2 | udk | BMQ_4549 | BMQ_4603 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uridine kinase. | 0.925 |
cdd-2 | upp | BMQ_4549 | BMQ_5159 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.401 |
cdd-2 | yfkN | BMQ_4549 | BMQ_2701 | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | 0.907 |
cmk | pyrF | BMQ_4346 | BMQ_4249 | Cytidylate kinase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.683 |
cmk | pyrH | BMQ_4346 | BMQ_4163 | Cytidylate kinase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.491 |
cmk | pyrR | BMQ_4346 | BMQ_4257 | Cytidylate kinase. | Uracil phosphoribosyl transferase/pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.608 |
cmk | udk | BMQ_4346 | BMQ_4603 | Cytidylate kinase. | Uridine kinase. | 0.929 |
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