STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_4693Conserved hypothetical protein. (333 aa)    
Predicted Functional Partners:
BMQ_4828
Protein of unknown function (DUF1444); Belongs to the UPF0354 family.
 
    0.759
BMQ_0723
Conserved hypothetical protein.
 
  
 0.751
fliJ
Flagellar export protein FliJ.
  
     0.746
BMQ_0703
Conserved hypothetical protein; Belongs to the UPF0736 family.
  
     0.737
BMQ_4599
Protein of unknown function (DUF1510).
  
     0.734
BMQ_0740
Conserved hypothetical protein.
  
     0.730
BMQ_5197
Conserved hypothetical protein.
  
     0.722
BMQ_1362
Conserved hypothetical protein.
  
     0.721
BMQ_4838
Conserved hypothetical protein.
  
     0.719
ytkD
Nucleoside triphosphatase YtkD; Belongs to the Nudix hydrolase family.
  
   
 0.716
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.