Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pruADelta-1-pyrroline-5-carboxylate dehydrogenase. (523 aa)    
Predicted Functional Partners:
BMQ_5084
Proline dehydrogenase.
 
 0.975
gltA
Glutamate synthase, large subunit.
  
 
 0.929
rocG
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.926
gudB
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.926
rocD
Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.
  
 0.918
aspB
Aspartate aminotransferase.
   
 0.912
putB
Proline oxidase.
 
 0.911
BMQ_2467
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 0.909
glnA
Glutamine synthetase, type I.
  
 
 0.907
gltB
Glutamate synthase, small subunit.
    
 0.906
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
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