STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMQ_5145Integral membrane protein (DUF1779). (246 aa)    
Predicted Functional Partners:
BMQ_5146
Integral membrane protein (DUF1146).
 
  
 0.887
BMQ_4488
Conserved hypothetical protein.
  
   
 0.848
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
     
 0.819
BMQ_4533
Conserved hypothetical protein.
  
     0.753
ysxE
Spore coat protein YsxE.
  
     0.725
BMQ_0383
Conserved hypothetical protein.
  
     0.717
cotS
Spore coat protein S.
  
     0.710
gerM
Germination protein GerM.
  
     0.701
BMQ_0012
Conserved hypothetical protein.
  
     0.688
BMQ_4305
Conserved hypothetical protein.
  
     0.684
Your Current Organism:
Bacillus megaterium QM B1551
NCBI taxonomy Id: 545693
Other names: B. megaterium QM B1551, Bacillus megaterium str. QM B1551, Bacillus megaterium strain QM B1551
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.