Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEF85739.1Conserved hypothetical protein. (379 aa)    
Predicted Functional Partners:
AEF83919.1
Probable poly(beta-D-mannuronate) O-acetylase (Alginatebiosynthesis protein AlgI); Identified by match to protein family HMM PF03062; Belongs to the membrane-bound acyltransferase family.
 
     0.831
AEF83894.1
Putative polysaccharide biosynthesis/export domain protein.
     
 0.674
AEF86776.1
Putative lipopolysaccharide biosynthesis; Identified by match to protein family HMM PF02706.
       0.650
AEF86024.1
Polysaccharide biosynthesis protein CapD; Identified by match to protein family HMM PF02719.
       0.645
AEF86728.1
NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
  
 0.620
AEF85240.1
Sugar transferase; Identified by match to protein family HMM PF02397.
     
 0.612
AEF84286.1
Putative O-acyltransferase; Identified by match to protein family HMM PF01757.
     
 0.591
AEF85131.1
dTDP-rhamnosyl transferase RfbG; Identified by match to protein family HMM PF00535.
  
  
 0.540
AEF83582.1
Identified by match to protein family HMM PF00759.
 
   
 0.537
AEF85380.1
Peptidase S45, penicillin amidase.
       0.425
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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