STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83894.1Putative polysaccharide biosynthesis/export domain protein. (486 aa)    
Predicted Functional Partners:
AEF86776.1
Putative lipopolysaccharide biosynthesis; Identified by match to protein family HMM PF02706.
 
  
 0.971
AEF85967.1
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
  
 0.879
AEF86032.1
Putative lipopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02706.
 
  
 0.877
AEF83794.1
Putative lipopolysaccharide biosynthesis protein.
 
  
 0.853
AEF86428.1
Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.
  
  
 0.850
AEF86024.1
Polysaccharide biosynthesis protein CapD; Identified by match to protein family HMM PF02719.
  
  
 0.848
AEF85240.1
Sugar transferase; Identified by match to protein family HMM PF02397.
  
  
 0.821
AEF86728.1
NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
  
 0.723
AEF85739.1
Conserved hypothetical protein.
     
 0.669
AEF83919.1
Probable poly(beta-D-mannuronate) O-acetylase (Alginatebiosynthesis protein AlgI); Identified by match to protein family HMM PF03062; Belongs to the membrane-bound acyltransferase family.
       0.662
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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