STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86766.1Prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. (319 aa)    
Predicted Functional Partners:
AEF85950.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00702.
 
    0.926
AEF85006.1
Transporter.
       0.804
AEF85216.1
Glycosyltransferase; Identified by match to protein family HMM PF00535.
       0.778
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 0.766
AEF84277.1
Glycosyltransferase family 32; Identified by match to protein family HMM PF04488.
       0.697
AEF83710.1
Putative membrane protein; Overlaps another CDS with the same product name.
       0.625
AEF84535.1
Putative membrane protein; Overlaps another CDS with the same product name.
       0.618
AEF83534.1
Hypothetical protein; Identified by glimmer; putative.
       0.618
AEF87027.1
Hypothetical protein; Identified by glimmer; putative.
       0.618
AEF83699.1
Glycosyltransferase sugar-binding region DXD domain protein.
     
 0.601
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.