Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83930.1 | mtnP | TREPR_2000 | TREPR_0033 | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.672 |
| AEF84466.1 | apt | TREPR_0034 | TREPR_3432 | Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.425 |
| AEF84466.1 | mtnA | TREPR_0034 | TREPR_0035 | Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596. | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.928 |
| AEF84466.1 | mtnP | TREPR_0034 | TREPR_0033 | Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.806 |
| AEF85522.1 | apt | TREPR_0218 | TREPR_3432 | GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.993 |
| AEF85522.1 | mtnP | TREPR_0218 | TREPR_0033 | GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.631 |
| AEF85591.1 | mtnN | TREPR_0721 | TREPR_3166 | Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase); Identified by match to protein family HMM PF01979. | MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.909 |
| AEF85591.1 | mtnP | TREPR_0721 | TREPR_0033 | Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase); Identified by match to protein family HMM PF01979. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.934 |
| AEF86333.1 | mtnP | TREPR_0032 | TREPR_0033 | Hypothetical protein; Identified by glimmer; putative. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.438 |
| apt | AEF84466.1 | TREPR_3432 | TREPR_0034 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596. | 0.425 |
| apt | AEF85522.1 | TREPR_3432 | TREPR_0218 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888. | 0.993 |
| apt | mtnA | TREPR_3432 | TREPR_0035 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.468 |
| apt | mtnP | TREPR_3432 | TREPR_0033 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.896 |
| mtnA | AEF84466.1 | TREPR_0035 | TREPR_0034 | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596. | 0.928 |
| mtnA | apt | TREPR_0035 | TREPR_3432 | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.468 |
| mtnA | mtnP | TREPR_0035 | TREPR_0033 | S-methyl-5-thioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.990 |
| mtnN | AEF85591.1 | TREPR_3166 | TREPR_0721 | MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | Putative 5-methylthioadenosine/S-adenosylhomocysteine deaminase (MTA/SAH deaminase); Identified by match to protein family HMM PF01979. | 0.909 |
| mtnN | mtnP | TREPR_3166 | TREPR_0033 | MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.915 |
| mtnP | AEF83930.1 | TREPR_0033 | TREPR_2000 | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Arylacetamide deacetylase (aadac); Identified by match to protein family HMM PF07859. | 0.672 |
| mtnP | AEF84466.1 | TREPR_0033 | TREPR_0034 | Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596. | 0.806 |
page 1 of 2