Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF83672.1 | AEF84002.1 | TREPR_0046 | TREPR_0043 | Probable extracellular nuclease. | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | 0.754 |
AEF83672.1 | AEF84003.1 | TREPR_0046 | TREPR_0048 | Probable extracellular nuclease. | Hypothetical protein; Identified by glimmer; putative. | 0.433 |
AEF83672.1 | AEF84452.1 | TREPR_0046 | TREPR_0047 | Probable extracellular nuclease. | Conserved hypothetical protein; Identified by match to protein family HMM PF07523. | 0.572 |
AEF83672.1 | AEF85640.1 | TREPR_0046 | TREPR_0044 | Probable extracellular nuclease. | Putative lipoprotein. | 0.748 |
AEF83672.1 | AEF86132.1 | TREPR_0046 | TREPR_0041 | Probable extracellular nuclease. | Hypothetical protein; Identified by glimmer; putative. | 0.472 |
AEF83672.1 | AEF86361.1 | TREPR_0046 | TREPR_2436 | Probable extracellular nuclease. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | 0.417 |
AEF83672.1 | AEF86402.1 | TREPR_0046 | TREPR_0045 | Probable extracellular nuclease. | Probable extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM PF03781. | 0.808 |
AEF83672.1 | AEF86765.1 | TREPR_0046 | TREPR_0042 | Probable extracellular nuclease. | Putative tetratricopeptide TPR_2 repeat protein. | 0.752 |
AEF84002.1 | AEF83672.1 | TREPR_0043 | TREPR_0046 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Probable extracellular nuclease. | 0.754 |
AEF84002.1 | AEF84003.1 | TREPR_0043 | TREPR_0048 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Hypothetical protein; Identified by glimmer; putative. | 0.420 |
AEF84002.1 | AEF84452.1 | TREPR_0043 | TREPR_0047 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Conserved hypothetical protein; Identified by match to protein family HMM PF07523. | 0.552 |
AEF84002.1 | AEF85640.1 | TREPR_0043 | TREPR_0044 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Putative lipoprotein. | 0.773 |
AEF84002.1 | AEF86132.1 | TREPR_0043 | TREPR_0041 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Hypothetical protein; Identified by glimmer; putative. | 0.487 |
AEF84002.1 | AEF86402.1 | TREPR_0043 | TREPR_0045 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Probable extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM PF03781. | 0.754 |
AEF84002.1 | AEF86765.1 | TREPR_0043 | TREPR_0042 | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | Putative tetratricopeptide TPR_2 repeat protein. | 0.787 |
AEF84003.1 | AEF83672.1 | TREPR_0048 | TREPR_0046 | Hypothetical protein; Identified by glimmer; putative. | Probable extracellular nuclease. | 0.433 |
AEF84003.1 | AEF84002.1 | TREPR_0048 | TREPR_0043 | Hypothetical protein; Identified by glimmer; putative. | Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719. | 0.420 |
AEF84003.1 | AEF84452.1 | TREPR_0048 | TREPR_0047 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF07523. | 0.572 |
AEF84003.1 | AEF85640.1 | TREPR_0048 | TREPR_0044 | Hypothetical protein; Identified by glimmer; putative. | Putative lipoprotein. | 0.420 |
AEF84003.1 | AEF86402.1 | TREPR_0048 | TREPR_0045 | Hypothetical protein; Identified by glimmer; putative. | Probable extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM PF03781. | 0.433 |
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