STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83672.1Probable extracellular nuclease. (992 aa)    
Predicted Functional Partners:
AEF86402.1
Probable extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM PF03781.
 
    
0.808
AEF84769.1
Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
 0.801
AEF84002.1
Tetratricopeptide repeat domain protein; Identified by match to protein family HMM PF07719.
  
    0.754
AEF86765.1
Putative tetratricopeptide TPR_2 repeat protein.
       0.752
AEF85640.1
Putative lipoprotein.
       0.748
AEF84955.1
Putative lipoprotein.
    
 
 0.725
AEF84452.1
Conserved hypothetical protein; Identified by match to protein family HMM PF07523.
       0.572
AEF84389.1
Conserved hypothetical protein.
 
  
 0.539
AEF86132.1
Hypothetical protein; Identified by glimmer; putative.
       0.472
AEF84780.1
Probable extracellular nuclease.
 
 
0.466
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.