Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83657.1 | AEF83692.1 | TREPR_0770 | TREPR_2324 | Conserved hypothetical protein. | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.774 |
| AEF83657.1 | AEF83912.1 | TREPR_0770 | TREPR_2866 | Conserved hypothetical protein. | 22.5 kDa protein. | 0.774 |
| AEF83657.1 | AEF84520.1 | TREPR_0770 | TREPR_2679 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.783 |
| AEF83657.1 | AEF84743.1 | TREPR_0770 | TREPR_0054 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.742 |
| AEF83657.1 | AEF84981.1 | TREPR_0770 | TREPR_2465 | Conserved hypothetical protein. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.788 |
| AEF83657.1 | AEF85133.1 | TREPR_0770 | TREPR_1027 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.786 |
| AEF83657.1 | AEF85896.1 | TREPR_0770 | TREPR_1102 | Conserved hypothetical protein. | Fibronectin type III domain protein; Identified by match to protein family HMM PF00041. | 0.774 |
| AEF83657.1 | AEF85932.1 | TREPR_0770 | TREPR_1642 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00691. | 0.774 |
| AEF83657.1 | AEF86579.1 | TREPR_0770 | TREPR_1843 | Conserved hypothetical protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.774 |
| AEF83657.1 | AEF86875.1 | TREPR_0770 | TREPR_0075 | Conserved hypothetical protein. | Tetratricopeptide repeat domain protein. | 0.774 |
| AEF83692.1 | AEF83657.1 | TREPR_2324 | TREPR_0770 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Conserved hypothetical protein. | 0.774 |
| AEF83692.1 | AEF83912.1 | TREPR_2324 | TREPR_2866 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 22.5 kDa protein. | 0.772 |
| AEF83692.1 | AEF84520.1 | TREPR_2324 | TREPR_2679 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Hypothetical protein; Identified by glimmer; putative. | 0.769 |
| AEF83692.1 | AEF84743.1 | TREPR_2324 | TREPR_0054 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Conserved hypothetical protein. | 0.730 |
| AEF83692.1 | AEF84981.1 | TREPR_2324 | TREPR_2465 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Radical SAM domain protein; Identified by match to protein family HMM PF04055. | 0.766 |
| AEF83692.1 | AEF85133.1 | TREPR_2324 | TREPR_1027 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF83692.1 | AEF85896.1 | TREPR_2324 | TREPR_1102 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Fibronectin type III domain protein; Identified by match to protein family HMM PF00041. | 0.771 |
| AEF83692.1 | AEF85932.1 | TREPR_2324 | TREPR_1642 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Identified by match to protein family HMM PF00691. | 0.772 |
| AEF83692.1 | AEF86579.1 | TREPR_2324 | TREPR_1843 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.774 |
| AEF83692.1 | AEF86875.1 | TREPR_2324 | TREPR_0075 | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | Tetratricopeptide repeat domain protein. | 0.774 |
page 1 of 6