Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEF83606.1 | AEF83657.1 | TREPR_2571 | TREPR_0770 | Putative cell division protein FtsQ; Essential cell division protein. | Conserved hypothetical protein. | 0.783 |
AEF83606.1 | AEF83692.1 | TREPR_2571 | TREPR_2324 | Putative cell division protein FtsQ; Essential cell division protein. | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.772 |
AEF83606.1 | AEF83778.1 | TREPR_2571 | TREPR_2926 | Putative cell division protein FtsQ; Essential cell division protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF04471; match to protein family HMM PF07719; match to protein family HMM PF07720. | 0.767 |
AEF83606.1 | AEF84520.1 | TREPR_2571 | TREPR_2679 | Putative cell division protein FtsQ; Essential cell division protein. | Hypothetical protein; Identified by glimmer; putative. | 0.769 |
AEF83606.1 | AEF85133.1 | TREPR_2571 | TREPR_1027 | Putative cell division protein FtsQ; Essential cell division protein. | Hypothetical protein; Identified by glimmer; putative. | 0.781 |
AEF83606.1 | AEF85932.1 | TREPR_2571 | TREPR_1642 | Putative cell division protein FtsQ; Essential cell division protein. | Identified by match to protein family HMM PF00691. | 0.769 |
AEF83606.1 | AEF86140.1 | TREPR_2571 | TREPR_0077 | Putative cell division protein FtsQ; Essential cell division protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02922. | 0.753 |
AEF83606.1 | AEF86579.1 | TREPR_2571 | TREPR_1843 | Putative cell division protein FtsQ; Essential cell division protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.772 |
AEF83606.1 | AEF86875.1 | TREPR_2571 | TREPR_0075 | Putative cell division protein FtsQ; Essential cell division protein. | Tetratricopeptide repeat domain protein. | 0.774 |
AEF83606.1 | cdsA_1 | TREPR_2571 | TREPR_0073 | Putative cell division protein FtsQ; Essential cell division protein. | Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148. | 0.746 |
AEF83657.1 | AEF83606.1 | TREPR_0770 | TREPR_2571 | Conserved hypothetical protein. | Putative cell division protein FtsQ; Essential cell division protein. | 0.783 |
AEF83657.1 | AEF83692.1 | TREPR_0770 | TREPR_2324 | Conserved hypothetical protein. | Putative TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721. | 0.774 |
AEF83657.1 | AEF83778.1 | TREPR_0770 | TREPR_2926 | Conserved hypothetical protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF04471; match to protein family HMM PF07719; match to protein family HMM PF07720. | 0.771 |
AEF83657.1 | AEF84520.1 | TREPR_0770 | TREPR_2679 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.783 |
AEF83657.1 | AEF85133.1 | TREPR_0770 | TREPR_1027 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.786 |
AEF83657.1 | AEF85932.1 | TREPR_0770 | TREPR_1642 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00691. | 0.774 |
AEF83657.1 | AEF86140.1 | TREPR_0770 | TREPR_0077 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF02922. | 0.774 |
AEF83657.1 | AEF86579.1 | TREPR_0770 | TREPR_1843 | Conserved hypothetical protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.774 |
AEF83657.1 | AEF86875.1 | TREPR_0770 | TREPR_0075 | Conserved hypothetical protein. | Tetratricopeptide repeat domain protein. | 0.774 |
AEF83657.1 | cdsA_1 | TREPR_0770 | TREPR_0073 | Conserved hypothetical protein. | Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148. | 0.760 |
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