STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86438.1PotD protein; Identified by match to protein family HMM PF01547. (389 aa)    
Predicted Functional Partners:
AEF84228.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
  0.980
AEF83583.1
PotB protein; Identified by match to protein family HMM PF00528.
 
  
  0.968
AEF85361.1
Spermidine/putrescine import ATP-binding protein PotA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
       0.619
AEF85753.1
Putative phosphodiesterase; Identified by match to protein family HMM PF03009.
       0.571
AEF86060.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08902.
       0.545
AEF85116.1
Putative periplasmic binding proteins and sugar binding domain of the LacI family; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
       0.419
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.