Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83583.1 | AEF84228.1 | TREPR_0086 | TREPR_0087 | PotB protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.993 |
| AEF83583.1 | AEF84542.1 | TREPR_0086 | TREPR_0090 | PotB protein; Identified by match to protein family HMM PF00528. | Hypothetical protein; Identified by glimmer; putative. | 0.409 |
| AEF83583.1 | AEF85361.1 | TREPR_0086 | TREPR_0085 | PotB protein; Identified by match to protein family HMM PF00528. | Spermidine/putrescine import ATP-binding protein PotA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.969 |
| AEF83583.1 | AEF85753.1 | TREPR_0086 | TREPR_0088 | PotB protein; Identified by match to protein family HMM PF00528. | Putative phosphodiesterase; Identified by match to protein family HMM PF03009. | 0.702 |
| AEF83583.1 | AEF86060.1 | TREPR_0086 | TREPR_0089 | PotB protein; Identified by match to protein family HMM PF00528. | Conserved hypothetical protein; Identified by match to protein family HMM PF08902. | 0.691 |
| AEF83583.1 | AEF86438.1 | TREPR_0086 | TREPR_0084 | PotB protein; Identified by match to protein family HMM PF00528. | PotD protein; Identified by match to protein family HMM PF01547. | 0.968 |
| AEF84228.1 | AEF83583.1 | TREPR_0087 | TREPR_0086 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | PotB protein; Identified by match to protein family HMM PF00528. | 0.993 |
| AEF84228.1 | AEF84542.1 | TREPR_0087 | TREPR_0090 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Hypothetical protein; Identified by glimmer; putative. | 0.414 |
| AEF84228.1 | AEF85361.1 | TREPR_0087 | TREPR_0085 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Spermidine/putrescine import ATP-binding protein PotA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.958 |
| AEF84228.1 | AEF85753.1 | TREPR_0087 | TREPR_0088 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative phosphodiesterase; Identified by match to protein family HMM PF03009. | 0.708 |
| AEF84228.1 | AEF86060.1 | TREPR_0087 | TREPR_0089 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Conserved hypothetical protein; Identified by match to protein family HMM PF08902. | 0.701 |
| AEF84228.1 | AEF86438.1 | TREPR_0087 | TREPR_0084 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | PotD protein; Identified by match to protein family HMM PF01547. | 0.980 |
| AEF84542.1 | AEF83583.1 | TREPR_0090 | TREPR_0086 | Hypothetical protein; Identified by glimmer; putative. | PotB protein; Identified by match to protein family HMM PF00528. | 0.409 |
| AEF84542.1 | AEF84228.1 | TREPR_0090 | TREPR_0087 | Hypothetical protein; Identified by glimmer; putative. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.414 |
| AEF84542.1 | AEF85361.1 | TREPR_0090 | TREPR_0085 | Hypothetical protein; Identified by glimmer; putative. | Spermidine/putrescine import ATP-binding protein PotA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.409 |
| AEF84542.1 | AEF85753.1 | TREPR_0090 | TREPR_0088 | Hypothetical protein; Identified by glimmer; putative. | Putative phosphodiesterase; Identified by match to protein family HMM PF03009. | 0.450 |
| AEF84542.1 | AEF86060.1 | TREPR_0090 | TREPR_0089 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF08902. | 0.450 |
| AEF85361.1 | AEF83583.1 | TREPR_0085 | TREPR_0086 | Spermidine/putrescine import ATP-binding protein PotA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | PotB protein; Identified by match to protein family HMM PF00528. | 0.969 |
| AEF85361.1 | AEF84228.1 | TREPR_0085 | TREPR_0087 | Spermidine/putrescine import ATP-binding protein PotA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.958 |
| AEF85361.1 | AEF84542.1 | TREPR_0085 | TREPR_0090 | Spermidine/putrescine import ATP-binding protein PotA; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | Hypothetical protein; Identified by glimmer; putative. | 0.409 |
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