Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83847.1 | AEF84691.1 | TREPR_1064 | TREPR_0123 | Conserved hypothetical protein. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.634 |
| AEF83847.1 | AEF86045.1 | TREPR_1064 | TREPR_3490 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00485. | 0.400 |
| AEF84691.1 | AEF83847.1 | TREPR_0123 | TREPR_1064 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | Conserved hypothetical protein. | 0.634 |
| AEF84691.1 | AEF85157.1 | TREPR_0123 | TREPR_0124 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | Hypothetical protein; Identified by glimmer; putative. | 0.506 |
| AEF84691.1 | AEF85675.1 | TREPR_0123 | TREPR_0011 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | O-methyltransferase. | 0.634 |
| AEF84691.1 | AEF86045.1 | TREPR_0123 | TREPR_3490 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | Identified by match to protein family HMM PF00485. | 0.650 |
| AEF84691.1 | AEF86480.1 | TREPR_0123 | TREPR_3883 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | O-methyltransferase. | 0.634 |
| AEF84691.1 | AEF86823.1 | TREPR_0123 | TREPR_0573 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | Identified by match to protein family HMM PF00899. | 0.435 |
| AEF84691.1 | ackA | TREPR_0123 | TREPR_1176 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.612 |
| AEF84691.1 | rlmN | TREPR_0123 | TREPR_1723 | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.427 |
| AEF85157.1 | AEF84691.1 | TREPR_0124 | TREPR_0123 | Hypothetical protein; Identified by glimmer; putative. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.506 |
| AEF85675.1 | AEF84691.1 | TREPR_0011 | TREPR_0123 | O-methyltransferase. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.634 |
| AEF85675.1 | AEF86045.1 | TREPR_0011 | TREPR_3490 | O-methyltransferase. | Identified by match to protein family HMM PF00485. | 0.400 |
| AEF86045.1 | AEF83847.1 | TREPR_3490 | TREPR_1064 | Identified by match to protein family HMM PF00485. | Conserved hypothetical protein. | 0.400 |
| AEF86045.1 | AEF84691.1 | TREPR_3490 | TREPR_0123 | Identified by match to protein family HMM PF00485. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.650 |
| AEF86045.1 | AEF85675.1 | TREPR_3490 | TREPR_0011 | Identified by match to protein family HMM PF00485. | O-methyltransferase. | 0.400 |
| AEF86045.1 | AEF86480.1 | TREPR_3490 | TREPR_3883 | Identified by match to protein family HMM PF00485. | O-methyltransferase. | 0.400 |
| AEF86480.1 | AEF84691.1 | TREPR_3883 | TREPR_0123 | O-methyltransferase. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.634 |
| AEF86480.1 | AEF86045.1 | TREPR_3883 | TREPR_3490 | O-methyltransferase. | Identified by match to protein family HMM PF00485. | 0.400 |
| AEF86823.1 | AEF84691.1 | TREPR_0573 | TREPR_0123 | Identified by match to protein family HMM PF00899. | Peptidase, U32 family; Identified by match to protein family HMM PF01136. | 0.435 |
page 1 of 2