STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85286.1D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. (344 aa)    
Predicted Functional Partners:
AEF84477.1
Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.
 
 
 0.929
AEF84822.1
Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.
 
 
 0.925
xylB
Xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312.
 
 
 0.924
xylA
Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family.
     
 0.912
AEF86922.1
Sorbose reductase SOU1 (Sorbitol utilization proteinSOU1); Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
 
  
 0.883
AEF85701.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
 
  
 0.566
AEF86534.1
6,7-dihydropteridine reductase; Identified by match to protein family HMM PF00881.
  
    0.560
bioF
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
  
 0.546
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.538
thrS
threonine--tRNA ligase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.520
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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