Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84097.1 | AEF85117.1 | TREPR_2572 | TREPR_0176 | Stage V sporulation protein E; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | 0.609 |
| AEF84097.1 | AEF85321.1 | TREPR_2572 | TREPR_2209 | Stage V sporulation protein E; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793. | 0.949 |
| AEF84097.1 | ftsA | TREPR_2572 | TREPR_2570 | Stage V sporulation protein E; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.934 |
| AEF84097.1 | mrdA | TREPR_2572 | TREPR_2328 | Stage V sporulation protein E; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | Penicillin-binding protein 2; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. | 0.934 |
| AEF84723.1 | AEF85117.1 | TREPR_3861 | TREPR_0176 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | 0.588 |
| AEF84723.1 | metG | TREPR_3861 | TREPR_1795 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.501 |
| AEF84763.1 | AEF85117.1 | TREPR_2460 | TREPR_0176 | N-acetylmuramoyl-L-alanine amidase, family 3; Identified by match to protein family HMM PF01520. | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | 0.573 |
| AEF85114.1 | AEF85117.1 | TREPR_1359 | TREPR_0176 | MutL protein; Identified by match to protein family HMM TIGR01319. | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | 0.776 |
| AEF85117.1 | AEF84097.1 | TREPR_0176 | TREPR_2572 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | Stage V sporulation protein E; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.609 |
| AEF85117.1 | AEF84723.1 | TREPR_0176 | TREPR_3861 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.588 |
| AEF85117.1 | AEF84763.1 | TREPR_0176 | TREPR_2460 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | N-acetylmuramoyl-L-alanine amidase, family 3; Identified by match to protein family HMM PF01520. | 0.573 |
| AEF85117.1 | AEF85114.1 | TREPR_0176 | TREPR_1359 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | MutL protein; Identified by match to protein family HMM TIGR01319. | 0.776 |
| AEF85117.1 | AEF85321.1 | TREPR_0176 | TREPR_2209 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793. | 0.621 |
| AEF85117.1 | AEF86757.1 | TREPR_0176 | TREPR_1302 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | MutL protein; Identified by match to protein family HMM TIGR01319. | 0.776 |
| AEF85117.1 | ftsA | TREPR_0176 | TREPR_2570 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.869 |
| AEF85117.1 | metG | TREPR_0176 | TREPR_1795 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.571 |
| AEF85117.1 | mrdA | TREPR_0176 | TREPR_2328 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | Penicillin-binding protein 2; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. | 0.621 |
| AEF85117.1 | mrdB | TREPR_0176 | TREPR_2329 | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.609 |
| AEF85321.1 | AEF84097.1 | TREPR_2209 | TREPR_2572 | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793. | Stage V sporulation protein E; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. | 0.949 |
| AEF85321.1 | AEF85117.1 | TREPR_2209 | TREPR_0176 | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793. | Rare lipoprotein A; Identified by match to protein family HMM PF03330. | 0.621 |
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