STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84088.1Identified by match to protein family HMM PF01850. (131 aa)    
Predicted Functional Partners:
AEF85183.1
Putative prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
    0.784
AEF85195.1
Identified by match to protein family HMM TIGR01552.
 
    0.774
AEF85298.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR00305.
 
   
 0.759
AEF85656.1
Conserved hypothetical protein.
  
     0.525
AEF84883.1
Conserved hypothetical protein.
  
     0.450
AEF85181.1
Conserved hypothetical protein.
  
     0.450
AEF85534.1
Conserved hypothetical protein.
  
     0.431
AEF84272.1
Conserved hypothetical protein.
 
   
 0.403
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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