Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83858.1 | AEF84125.1 | TREPR_2401 | TREPR_0195 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | WfbF; Identified by match to protein family HMM PF00534. | 0.713 |
| AEF83858.1 | AEF84830.1 | TREPR_2401 | TREPR_2405 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.931 |
| AEF83858.1 | AEF84916.1 | TREPR_2401 | TREPR_2393 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.873 |
| AEF83858.1 | AEF85968.1 | TREPR_2401 | TREPR_2395 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.620 |
| AEF83858.1 | AEF86387.1 | TREPR_2401 | TREPR_2398 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Conserved hypothetical protein; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662. | 0.728 |
| AEF83858.1 | AEF86428.1 | TREPR_2401 | TREPR_2408 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025. | 0.639 |
| AEF83858.1 | glf | TREPR_2401 | TREPR_2533 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | UDP-galactopyranose mutase; Identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031. | 0.473 |
| AEF84125.1 | AEF83858.1 | TREPR_0195 | TREPR_2401 | WfbF; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.713 |
| AEF84125.1 | AEF84830.1 | TREPR_0195 | TREPR_2405 | WfbF; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.534 |
| AEF84125.1 | AEF84916.1 | TREPR_0195 | TREPR_2393 | WfbF; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.646 |
| AEF84125.1 | AEF85009.1 | TREPR_0195 | TREPR_2602 | WfbF; Identified by match to protein family HMM PF00534. | Putative mannosyltransferase; Identified by match to protein family HMM PF00534. | 0.629 |
| AEF84125.1 | AEF85586.1 | TREPR_0195 | TREPR_0194 | WfbF; Identified by match to protein family HMM PF00534. | Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535. | 0.788 |
| AEF84125.1 | AEF85968.1 | TREPR_0195 | TREPR_2395 | WfbF; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.694 |
| AEF84125.1 | AEF86387.1 | TREPR_0195 | TREPR_2398 | WfbF; Identified by match to protein family HMM PF00534. | Conserved hypothetical protein; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662. | 0.441 |
| AEF84125.1 | AEF86428.1 | TREPR_0195 | TREPR_2408 | WfbF; Identified by match to protein family HMM PF00534. | Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025. | 0.541 |
| AEF84125.1 | AEF87014.1 | TREPR_0195 | TREPR_0196 | WfbF; Identified by match to protein family HMM PF00534. | Methyltransferase FkbM. | 0.576 |
| AEF84125.1 | glf | TREPR_0195 | TREPR_2533 | WfbF; Identified by match to protein family HMM PF00534. | UDP-galactopyranose mutase; Identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031. | 0.472 |
| AEF84830.1 | AEF83858.1 | TREPR_2405 | TREPR_2401 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.931 |
| AEF84830.1 | AEF84125.1 | TREPR_2405 | TREPR_0195 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | WfbF; Identified by match to protein family HMM PF00534. | 0.534 |
| AEF84830.1 | AEF84916.1 | TREPR_2405 | TREPR_2393 | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534. | 0.864 |
page 1 of 4