STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85245.1Methyltransferase FkbM family; Identified by match to protein family HMM TIGR01444. (273 aa)    
Predicted Functional Partners:
AEF86392.1
Putative membrane protein.
  
  
 0.787
AEF84769.1
Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
    
   0.703
AEF86428.1
Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.
  
  
 0.655
AEF83844.1
UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase 1) (UXS-1); Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
  
    0.633
AEF84641.1
ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
 
  
 0.497
AEF86825.1
O-antigen export system permease protein RfbA; Identified by match to protein family HMM PF01061.
 
  
 0.470
AEF83761.1
Hypothetical protein; Identified by glimmer; putative.
       0.438
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.